Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 ENPP7P8-202ENST00000527856 1345 ntBASIC14.91□□□□□ -0.02
RIF1Q5UIP0 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SNORD3B-2-202ENST00000571722 791 ntBASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC004522.1-201ENST00000419978 654 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AL139339.2-201ENST00000608063 657 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC134407.2-201ENST00000625089 1978 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 MRPL37P1-201ENST00000592451 1337 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 HNRNPA1P58-201ENST00000403629 610 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 HIST2H2BA-201ENST00000412169 381 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 CR383656.3-201ENST00000551315 183 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC106820.3-201ENST00000561653 397 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 NUDT4P2-201ENST00000578341 546 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AP005212.2-201ENST00000584979 510 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 HMGB1P24-201ENST00000611897 328 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 AC073592.2-201ENST00000623062 780 ntBASIC14.9□□□□□ -0.02
RIF1Q5UIP0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIF1Q5UIP0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A7P-201ENST00000382628 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A23P-201ENST00000400136 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A21P-201ENST00000510875 1396 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A15P-201ENST00000514465 1395 ntBASIC14.89□□□□□ -0.03
RIF1Q5UIP0 FAM90A6P-201ENST00000515148 1394 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms