Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARS2Q5ST30 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
VARS2Q5ST30 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 CICP6-201ENST00000457191 2729 ntBASIC16.52■□□□□ 0.23
VARS2Q5ST30 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VARS2Q5ST30 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 SEPT7P7-201ENST00000420492 1301 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 AC016694.1-201ENST00000434179 700 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 ACTBP11-201ENST00000436287 1126 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 AP000812.2-201ENST00000538934 718 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 RN7SL219P-201ENST00000582872 296 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 AC025181.2-201ENST00000606994 802 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 AL355816.2-201ENST00000610049 647 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 AC244669.2-201ENST00000612320 853 ntBASIC16.51■□□□□ 0.23
VARS2Q5ST30 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
VARS2Q5ST30 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARS2Q5ST30 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 GNRHR2-203ENST00000581100 1187 ntBASIC16.5■□□□□ 0.23
VARS2Q5ST30 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VARS2Q5ST30 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARS2Q5ST30 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARS2Q5ST30 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.49■□□□□ 0.23
VARS2Q5ST30 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.49■□□□□ 0.23
VARS2Q5ST30 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms