Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MST1L-201ENST00000442552 2185 ntBASIC13.66□□□□□ -0.22
FREM1Q5H8C1 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AC104457.1-201ENST00000401024 814 ntBASIC13.66□□□□□ -0.22
FREM1Q5H8C1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MSTO2P-201ENST00000314835 1709 ntBASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 AC091951.1-201ENST00000512854 2465 ntBASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.66□□□□□ -0.22
FREM1Q5H8C1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC073347.1-201ENST00000421633 2643 ntBASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC112492.5-201ENST00000421897 457 ntBASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 KRT17P8-201ENST00000540749 863 ntBASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC068587.3-201ENST00000526613 355 ntBASIC13.65□□□□□ -0.22
FREM1Q5H8C1 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 MIR5189-201ENST00000577370 114 ntBASIC13.65□□□□□ -0.22
FREM1Q5H8C1 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.65□□□□□ -0.22
FREM1Q5H8C1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms