Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 MIR770-201ENST00000390219 98 ntBASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SPDYE17-201ENST00000412399 783 ntBASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 IGHV3-42-201ENST00000520410 361 ntBASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.89■□□□□ 0.13
KHDC1Q4VXA5 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AC100757.3-201ENST00000622361 1406 ntBASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 TSSK5P-201ENST00000423978 907 ntBASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AC093214.1-201ENST00000511688 1107 ntBASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 AL590560.3-201ENST00000623350 461 ntBASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 LINC01101-201ENST00000622953 1884 ntBASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
KHDC1Q4VXA5 KRT8P12-202ENST00000472924 1397 ntBASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 AC063926.3-201ENST00000624734 5658 ntBASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 HIST3H2BA-201ENST00000436555 524 ntBASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms