Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 MIR661-201ENST00000384842 89 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 GNAQP1-201ENST00000444815 1067 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 DOC2GP-202ENST00000514950 1163 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 AC025181.2-201ENST00000606994 802 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 AJ011932.1-201ENST00000621707 465 ntBASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PTPN20Q4JDL3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 BCRP1-201ENST00000444246 691 ntBASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 AL355385.1-201ENST00000606123 409 ntBASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PTPN20Q4JDL3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.4■□□□□ 0.22
PTPN20Q4JDL3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms