Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AC027369.6-201ENST00000525520 931 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 LINC01225-203ENST00000563550 1244 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AC084121.4-201ENST00000641598 221 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 AF228730.8-201ENST00000642140 221 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CHRFAM7AQ494W8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AC022494.1-201ENST00000466044 728 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AC004890.2-204ENST00000481968 304 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AL009183.1-201ENST00000603760 355 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AC073592.8-201ENST00000624126 511 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 U82695.1-201ENST00000635752 1889 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CHRFAM7AQ494W8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms