Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 IL9RP2-201ENST00000423948 1312 ntBASIC13.92□□□□□ -0.18
ODF4Q2M2E3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AC015656.1-201ENST00000624209 3578 ntBASIC13.92□□□□□ -0.18
ODF4Q2M2E3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.92□□□□□ -0.18
ODF4Q2M2E3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 RNA5SP416-201ENST00000516838 111 ntBASIC13.91□□□□□ -0.18
ODF4Q2M2E3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AC139749.1-202ENST00000617529 3139 ntBASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AGAP7P-201ENST00000582299 2062 ntBASIC13.91□□□□□ -0.18
ODF4Q2M2E3 AGAP14-201ENST00000624701 2060 ntBASIC13.91□□□□□ -0.18
ODF4Q2M2E3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ODF4Q2M2E3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
ODF4Q2M2E3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms