Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.33□□□□□ -0.28
EFNB3Q15768 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB3Q15768 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
EFNB3Q15768 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB3Q15768 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB3Q15768 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
EFNB3Q15768 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNB3Q15768 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 ATP5G2P4-201ENST00000442175 420 ntBASIC13.32□□□□□ -0.28
EFNB3Q15768 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB3Q15768 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB3Q15768 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB3Q15768 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB3Q15768 RAB43P1-201ENST00000561790 589 ntBASIC13.32□□□□□ -0.28
EFNB3Q15768 AL603832.2-201ENST00000566195 2125 ntBASIC13.32□□□□□ -0.28
EFNB3Q15768 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB3Q15768 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB3Q15768 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB3Q15768 AC093813.1-201ENST00000605066 256 ntBASIC13.32□□□□□ -0.28
EFNB3Q15768 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB3Q15768 RPSAP52-203ENST00000622976 1023 ntBASIC13.32□□□□□ -0.28
EFNB3Q15768 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB3Q15768 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
EFNB3Q15768 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB3Q15768 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 AL513477.1-201ENST00000602865 2407 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
EFNB3Q15768 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB3Q15768 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 AC079776.1-201ENST00000401540 1152 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 BOLA2P3-201ENST00000404566 256 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNB3Q15768 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 ACA64.2-201ENST00000459014 129 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 IGHV3-71-201ENST00000523324 359 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
EFNB3Q15768 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 AC009486.1-201ENST00000569860 813 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 MIR5189-201ENST00000577370 114 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB3Q15768 BTNL10-201ENST00000595971 695 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.31□□□□□ -0.28
EFNB3Q15768 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB3Q15768 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB3Q15768 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNB3Q15768 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB3Q15768 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
EFNB3Q15768 DRD5P1-201ENST00000456605 1438 ntBASIC13.3□□□□□ -0.28
EFNB3Q15768 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNB3Q15768 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.3□□□□□ -0.28
EFNB3Q15768 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms