Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AC126755.4-201ENST00000549796 1459 ntBASIC17.17■□□□□ 0.34
KCNA1Q09470 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
KCNA1Q09470 AL109954.1-202ENST00000564051 2148 ntBASIC17.17■□□□□ 0.34
KCNA1Q09470 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
KCNA1Q09470 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
KCNA1Q09470 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
KCNA1Q09470 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
KCNA1Q09470 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.16■□□□□ 0.34
KCNA1Q09470 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 MIR4745-201ENST00000577608 62 ntBASIC17.16■□□□□ 0.34
KCNA1Q09470 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.16■□□□□ 0.34
KCNA1Q09470 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.16■□□□□ 0.34
KCNA1Q09470 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 PKD1P5-201ENST00000532415 10291 ntBASIC17.16■□□□□ 0.34
KCNA1Q09470 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
KCNA1Q09470 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
KCNA1Q09470 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 AL133267.1-201ENST00000398220 340 ntBASIC17.15■□□□□ 0.34
KCNA1Q09470 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.15■□□□□ 0.34
KCNA1Q09470 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.15■□□□□ 0.34
KCNA1Q09470 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.15■□□□□ 0.34
KCNA1Q09470 AC008761.3-201ENST00000624803 892 ntBASIC17.15■□□□□ 0.34
KCNA1Q09470 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.15■□□□□ 0.34
KCNA1Q09470 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.15■□□□□ 0.34
KCNA1Q09470 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
KCNA1Q09470 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
KCNA1Q09470 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
KCNA1Q09470 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
KCNA1Q09470 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KCNA1Q09470 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
KCNA1Q09470 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNA1Q09470 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
KCNA1Q09470 AC006486.2-201ENST00000624246 2199 ntBASIC17.14■□□□□ 0.33
KCNA1Q09470 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KCNA1Q09470 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.14■□□□□ 0.33
KCNA1Q09470 KRT18P43-201ENST00000469825 1281 ntBASIC17.14■□□□□ 0.33
KCNA1Q09470 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.14■□□□□ 0.33
KCNA1Q09470 TPRX2P-201ENST00000535362 881 ntBASIC17.14■□□□□ 0.33
KCNA1Q09470 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
KCNA1Q09470 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNA1Q09470 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNA1Q09470 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
KCNA1Q09470 AC009118.2-201ENST00000613275 655 ntBASIC17.14■□□□□ 0.33
KCNA1Q09470 MIR8072-201ENST00000614241 80 ntBASIC17.14■□□□□ 0.33
KCNA1Q09470 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.14■□□□□ 0.33
KCNA1Q09470 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KCNA1Q09470 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms