Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 AC126335.2-201ENST00000623362 4637 ntBASIC14.89□□□□□ -0.03
CHRNB3Q05901 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNB3Q05901 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNB3Q05901 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC018892.3-201ENST00000623986 2499 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC009947.1-201ENST00000444350 727 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC109635.5-201ENST00000533593 962 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC243562.2-201ENST00000561247 970 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 MIR3687-2-201ENST00000577708 61 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 MIR4313-201ENST00000580760 101 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 MIR3687-1-201ENST00000614492 61 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AJ011931.1-201ENST00000618749 2492 ntBASIC14.88□□□□□ -0.03
CHRNB3Q05901 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNB3Q05901 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CHRNB3Q05901 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 AC005912.2-201ENST00000619492 2400 ntBASIC14.87□□□□□ -0.03
CHRNB3Q05901 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 AC138969.2-201ENST00000532739 9932 ntBASIC14.87□□□□□ -0.03
CHRNB3Q05901 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CHRNB3Q05901 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 DNAJB3-201ENST00000446806 729 ntBASIC14.87□□□□□ -0.03
CHRNB3Q05901 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
CHRNB3Q05901 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms