Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.26□□□□□ -0.29
COL10A1Q03692 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.26□□□□□ -0.29
COL10A1Q03692 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 AC097359.3-201ENST00000603982 1210 ntBASIC13.26□□□□□ -0.29
COL10A1Q03692 AC138035.3-201ENST00000622706 2791 ntBASIC13.26□□□□□ -0.29
COL10A1Q03692 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.26□□□□□ -0.29
COL10A1Q03692 AC093028.1-201ENST00000622998 982 ntBASIC13.26□□□□□ -0.29
COL10A1Q03692 AL607033.1-201ENST00000623900 1599 ntBASIC13.26□□□□□ -0.29
COL10A1Q03692 AC006058.4-201ENST00000624016 1670 ntBASIC13.26□□□□□ -0.29
COL10A1Q03692 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
COL10A1Q03692 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.26□□□□□ -0.29
COL10A1Q03692 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 AC127383.1-201ENST00000444697 1800 ntBASIC13.25□□□□□ -0.29
COL10A1Q03692 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.25□□□□□ -0.29
COL10A1Q03692 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.25□□□□□ -0.29
COL10A1Q03692 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC13.25□□□□□ -0.29
COL10A1Q03692 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.25□□□□□ -0.29
COL10A1Q03692 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
COL10A1Q03692 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 AC090616.6-203ENST00000579186 1945 ntBASIC13.25□□□□□ -0.29
COL10A1Q03692 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.25□□□□□ -0.29
COL10A1Q03692 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
COL10A1Q03692 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.24□□□□□ -0.29
COL10A1Q03692 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
COL10A1Q03692 PPT1-215ENST00000641471 2368 ntBASIC13.24□□□□□ -0.29
COL10A1Q03692 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.24□□□□□ -0.29
COL10A1Q03692 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.24□□□□□ -0.29
COL10A1Q03692 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.24□□□□□ -0.29
COL10A1Q03692 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
COL10A1Q03692 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
COL10A1Q03692 FO538757.1-201ENST00000623083 1397 ntBASIC13.24□□□□□ -0.29
COL10A1Q03692 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.24□□□□□ -0.29
COL10A1Q03692 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
COL10A1Q03692 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms