Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CDK3Q00526 AC079776.1-201ENST00000401540 1152 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 AP001582.1-201ENST00000525856 295 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.31■□□□□ 0.04
CDK3Q00526 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 HILS1-202ENST00000545329 423 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK3Q00526 AC009486.1-201ENST00000569860 813 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK3Q00526 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK3Q00526 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.31■□□□□ 0.04
CDK3Q00526 BTNL10-201ENST00000595971 695 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 AC233724.13-201ENST00000598383 410 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.31■□□□□ 0.04
CDK3Q00526 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK3Q00526 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 AL138799.1-201ENST00000448213 1675 ntBASIC15.31■□□□□ 0.04
CDK3Q00526 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK3Q00526 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK3Q00526 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK3Q00526 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 ARSEP1-201ENST00000420443 635 ntBASIC15.3■□□□□ 0.04
CDK3Q00526 AC112492.5-201ENST00000421897 457 ntBASIC15.3■□□□□ 0.04
CDK3Q00526 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.3■□□□□ 0.04
CDK3Q00526 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 AC068587.3-201ENST00000526613 355 ntBASIC15.3■□□□□ 0.04
CDK3Q00526 SLC25A47P1-201ENST00000531577 414 ntBASIC15.3■□□□□ 0.04
CDK3Q00526 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK3Q00526 RAB43P1-201ENST00000561790 589 ntBASIC15.3■□□□□ 0.04
CDK3Q00526 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK3Q00526 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK3Q00526 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDK3Q00526 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK3Q00526 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK3Q00526 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDK3Q00526 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
CDK3Q00526 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK3Q00526 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.29■□□□□ 0.04
CDK3Q00526 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK3Q00526 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK3Q00526 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms