Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.12□□□□□ -0.15
SUMO3P55854 AL353779.1-201ENST00000434793 351 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SUMO3P55854 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.12□□□□□ -0.15
SUMO3P55854 MIR4745-201ENST00000577608 62 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.12□□□□□ -0.15
SUMO3P55854 AL132655.2-201ENST00000596276 594 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 CICP6-201ENST00000457191 2729 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SUMO3P55854 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.11□□□□□ -0.15
SUMO3P55854 AC002472.2-201ENST00000442739 958 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 GNAQP1-201ENST00000444815 1067 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 TERF1P3-201ENST00000505638 1227 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.11□□□□□ -0.15
SUMO3P55854 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.11□□□□□ -0.15
SUMO3P55854 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.11□□□□□ -0.15
SUMO3P55854 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 RN7SL204P-201ENST00000582831 262 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.11□□□□□ -0.15
SUMO3P55854 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.11□□□□□ -0.15
SUMO3P55854 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 AC148477.4-201ENST00000613430 1793 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 AL139384.1-201ENST00000612143 3047 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SUMO3P55854 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SUMO3P55854 AL109954.1-202ENST00000564051 2148 ntBASIC14.11□□□□□ -0.15
SUMO3P55854 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SUMO3P55854 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 AL162727.3-201ENST00000635661 2787 ntBASIC14.1□□□□□ -0.15
SUMO3P55854 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
SUMO3P55854 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SUMO3P55854 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
SUMO3P55854 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms