Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PMS1P54277 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.19■□□□□ 0.34
PMS1P54277 AC051619.7-201ENST00000568314 623 ntBASIC17.19■□□□□ 0.34
PMS1P54277 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.19■□□□□ 0.34
PMS1P54277 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.19■□□□□ 0.34
PMS1P54277 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMS1P54277 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMS1P54277 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.19■□□□□ 0.34
PMS1P54277 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 ZBED1P1-201ENST00000502364 1930 ntBASIC17.18■□□□□ 0.34
PMS1P54277 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.18■□□□□ 0.34
PMS1P54277 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.18■□□□□ 0.34
PMS1P54277 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 MIR1233-2-201ENST00000408138 82 ntBASIC17.18■□□□□ 0.34
PMS1P54277 MIR1233-1-201ENST00000408722 82 ntBASIC17.18■□□□□ 0.34
PMS1P54277 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 AC092580.3-201ENST00000430932 139 ntBASIC17.18■□□□□ 0.34
PMS1P54277 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.18■□□□□ 0.34
PMS1P54277 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.18■□□□□ 0.34
PMS1P54277 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.18■□□□□ 0.34
PMS1P54277 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 AC015910.1-201ENST00000579400 975 ntBASIC17.18■□□□□ 0.34
PMS1P54277 AL691403.2-201ENST00000618460 490 ntBASIC17.18■□□□□ 0.34
PMS1P54277 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.18■□□□□ 0.34
PMS1P54277 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PMS1P54277 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.18■□□□□ 0.34
PMS1P54277 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.18■□□□□ 0.34
PMS1P54277 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PMS1P54277 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PMS1P54277 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms