Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
LIMK2P53671 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.78■□□□□ 0.12
LIMK2P53671 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.78■□□□□ 0.12
LIMK2P53671 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 SERBP1P5-201ENST00000510079 1181 ntBASIC15.78■□□□□ 0.12
LIMK2P53671 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
LIMK2P53671 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.78■□□□□ 0.12
LIMK2P53671 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.78■□□□□ 0.12
LIMK2P53671 PKD1P5-201ENST00000532415 10291 ntBASIC15.78■□□□□ 0.12
LIMK2P53671 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
LIMK2P53671 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
LIMK2P53671 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.78■□□□□ 0.12
LIMK2P53671 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 CICP24-201ENST00000605464 2705 ntBASIC15.77■□□□□ 0.12
LIMK2P53671 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
LIMK2P53671 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.77■□□□□ 0.12
LIMK2P53671 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.77■□□□□ 0.12
LIMK2P53671 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.77■□□□□ 0.12
LIMK2P53671 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
LIMK2P53671 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
LIMK2P53671 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.77■□□□□ 0.12
LIMK2P53671 RN7SL828P-201ENST00000607615 303 ntBASIC15.77■□□□□ 0.12
LIMK2P53671 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.77■□□□□ 0.11
LIMK2P53671 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 CETN4P-206ENST00000642099 2168 ntBASIC15.77■□□□□ 0.11
LIMK2P53671 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
LIMK2P53671 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.77■□□□□ 0.11
LIMK2P53671 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.77■□□□□ 0.11
LIMK2P53671 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
LIMK2P53671 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.77■□□□□ 0.11
LIMK2P53671 AGAP7P-201ENST00000582299 2062 ntBASIC15.77■□□□□ 0.11
LIMK2P53671 AGAP14-201ENST00000624701 2060 ntBASIC15.77■□□□□ 0.11
LIMK2P53671 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.77■□□□□ 0.11
LIMK2P53671 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
LIMK2P53671 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
LIMK2P53671 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.77■□□□□ 0.11
LIMK2P53671 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.77■□□□□ 0.11
LIMK2P53671 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 FAM45BP-202ENST00000592932 1624 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LIMK2P53671 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.76■□□□□ 0.11
LIMK2P53671 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.76■□□□□ 0.11
LIMK2P53671 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 AC063926.2-201ENST00000623766 1308 ntBASIC15.76■□□□□ 0.11
LIMK2P53671 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LIMK2P53671 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LIMK2P53671 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms