Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.21■□□□□ 0.35
GPC3P51654 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 AC233724.13-201ENST00000598383 410 ntBASIC17.21■□□□□ 0.35
GPC3P51654 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 MIR6805-201ENST00000615055 62 ntBASIC17.21■□□□□ 0.35
GPC3P51654 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC3P51654 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.21■□□□□ 0.35
GPC3P51654 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC3P51654 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC3P51654 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
GPC3P51654 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
GPC3P51654 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.21■□□□□ 0.34
GPC3P51654 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC3P51654 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC3P51654 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC3P51654 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GPC3P51654 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 AC018665.1-201ENST00000622927 1362 ntBASIC17.2■□□□□ 0.34
GPC3P51654 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 MIR658-201ENST00000385210 100 ntBASIC17.2■□□□□ 0.34
GPC3P51654 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 AC234783.1-201ENST00000441761 496 ntBASIC17.2■□□□□ 0.34
GPC3P51654 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.2■□□□□ 0.34
GPC3P51654 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 AC026410.3-201ENST00000514280 936 ntBASIC17.2■□□□□ 0.34
GPC3P51654 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 SLC25A47P1-201ENST00000531577 414 ntBASIC17.2■□□□□ 0.34
GPC3P51654 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.2■□□□□ 0.34
GPC3P51654 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.2■□□□□ 0.34
GPC3P51654 CLUHP6-201ENST00000580789 941 ntBASIC17.2■□□□□ 0.34
GPC3P51654 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.2■□□□□ 0.34
GPC3P51654 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
GPC3P51654 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.2■□□□□ 0.34
GPC3P51654 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 DRD5P1-201ENST00000456605 1438 ntBASIC17.2■□□□□ 0.34
GPC3P51654 AC046158.3-201ENST00000624947 2558 ntBASIC17.2■□□□□ 0.34
GPC3P51654 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC3P51654 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC3P51654 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
GPC3P51654 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
GPC3P51654 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
GPC3P51654 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.19■□□□□ 0.34
GPC3P51654 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.19■□□□□ 0.34
GPC3P51654 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.19■□□□□ 0.34
GPC3P51654 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 SNX29P1-201ENST00000548357 1007 ntBASIC17.19■□□□□ 0.34
GPC3P51654 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.19■□□□□ 0.34
GPC3P51654 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.19■□□□□ 0.34
GPC3P51654 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
GPC3P51654 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.19■□□□□ 0.34
GPC3P51654 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.19■□□□□ 0.34
GPC3P51654 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
GPC3P51654 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms