Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.94■□□□□ 0.3
PDE6CP51160 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.94■□□□□ 0.3
PDE6CP51160 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDE6CP51160 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.94■□□□□ 0.3
PDE6CP51160 AC127383.1-201ENST00000444697 1800 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 AC009090.5-201ENST00000624886 2285 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PDE6CP51160 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.93■□□□□ 0.3
PDE6CP51160 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 PIN1P1-201ENST00000412108 996 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 SPDYE17-201ENST00000412399 783 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 RN7SL618P-201ENST00000477850 296 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.93■□□□□ 0.3
PDE6CP51160 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.93■□□□□ 0.3
PDE6CP51160 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.93■□□□□ 0.3
PDE6CP51160 AC004233.3-201ENST00000607794 1269 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 AC006058.4-201ENST00000624016 1670 ntBASIC16.93■□□□□ 0.3
PDE6CP51160 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PDE6CP51160 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.93■□□□□ 0.3
PDE6CP51160 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.93■□□□□ 0.3
PDE6CP51160 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PDE6CP51160 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 MRPS18AP1-201ENST00000414458 589 ntBASIC16.92■□□□□ 0.3
PDE6CP51160 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.92■□□□□ 0.3
PDE6CP51160 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 AC136604.1-201ENST00000418535 575 ntBASIC16.92■□□□□ 0.3
PDE6CP51160 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.92■□□□□ 0.3
PDE6CP51160 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.92■□□□□ 0.3
PDE6CP51160 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDE6CP51160 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.92■□□□□ 0.3
PDE6CP51160 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.92■□□□□ 0.3
PDE6CP51160 AC097359.3-201ENST00000603982 1210 ntBASIC16.92■□□□□ 0.3
PDE6CP51160 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDE6CP51160 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms