Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.16■□□□□ 0.34
CPT1AP50416 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.16■□□□□ 0.34
CPT1AP50416 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 AKR7A2P1-201ENST00000460134 915 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 SCARNA20.5-201ENST00000516991 142 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.16■□□□□ 0.34
CPT1AP50416 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 AL096828.3-201ENST00000615354 462 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 AL158070.2-201ENST00000623713 1621 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 AC138028.6-201ENST00000616106 1482 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
CPT1AP50416 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.16■□□□□ 0.34
CPT1AP50416 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CPT1AP50416 AL662844.4-201ENST00000606367 2838 ntBASIC17.16■□□□□ 0.34
CPT1AP50416 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPT1AP50416 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CPT1AP50416 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 SLC25A24P2-201ENST00000415059 510 ntBASIC17.15■□□□□ 0.34
CPT1AP50416 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.15■□□□□ 0.34
CPT1AP50416 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 AC020914.3-201ENST00000594712 304 ntBASIC17.15■□□□□ 0.34
CPT1AP50416 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.15■□□□□ 0.34
CPT1AP50416 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 AL645728.2-202ENST00000641679 227 ntBASIC17.15■□□□□ 0.34
CPT1AP50416 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CPT1AP50416 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.15■□□□□ 0.34
CPT1AP50416 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
CPT1AP50416 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CPT1AP50416 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPT1AP50416 AC084364.1-201ENST00000551967 1556 ntBASIC17.15■□□□□ 0.34
CPT1AP50416 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.14■□□□□ 0.34
CPT1AP50416 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.14■□□□□ 0.34
CPT1AP50416 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CPT1AP50416 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPT1AP50416 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 MIR663B-201ENST00000408361 115 ntBASIC17.14■□□□□ 0.33
CPT1AP50416 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.14■□□□□ 0.33
CPT1AP50416 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 AC079178.1-201ENST00000420915 656 ntBASIC17.14■□□□□ 0.33
CPT1AP50416 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.14■□□□□ 0.33
CPT1AP50416 FAM8A4P-201ENST00000435433 1213 ntBASIC17.14■□□□□ 0.33
CPT1AP50416 POM121L10P-201ENST00000436994 1285 ntBASIC17.14■□□□□ 0.33
CPT1AP50416 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.14■□□□□ 0.33
CPT1AP50416 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPT1AP50416 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.14■□□□□ 0.33
CPT1AP50416 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.14■□□□□ 0.33
CPT1AP50416 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.14■□□□□ 0.33
CPT1AP50416 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms