Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.38■□□□□ 0.05
CXCL12P48061 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.38■□□□□ 0.05
CXCL12P48061 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CXCL12P48061 PRKXP1-201ENST00000561423 1122 ntBASIC15.38■□□□□ 0.05
CXCL12P48061 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.38■□□□□ 0.05
CXCL12P48061 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.38■□□□□ 0.05
CXCL12P48061 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCL12P48061 RN7SL574P-201ENST00000581512 297 ntBASIC15.38■□□□□ 0.05
CXCL12P48061 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.38■□□□□ 0.05
CXCL12P48061 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CXCL12P48061 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 AL158070.2-201ENST00000623713 1621 ntBASIC15.38■□□□□ 0.05
CXCL12P48061 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.38■□□□□ 0.05
CXCL12P48061 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCL12P48061 AC092978.1-202ENST00000637590 1327 ntBASIC15.38■□□□□ 0.05
CXCL12P48061 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.38■□□□□ 0.05
CXCL12P48061 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXCL12P48061 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 RPL17P11-201ENST00000417593 544 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 POM121L8P-201ENST00000417732 1281 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 AC007274.2-201ENST00000421675 662 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 POM121L9P-203ENST00000441984 1285 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 CHMP1AP1-201ENST00000445563 662 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 AC012618.1-201ENST00000461223 412 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 AC022616.1-201ENST00000518688 554 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CXCL12P48061 AC092171.3-201ENST00000610122 2651 ntBASIC15.37■□□□□ 0.05
CXCL12P48061 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.37■□□□□ 0.05
CXCL12P48061 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CXCL12P48061 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.36■□□□□ 0.05
CXCL12P48061 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.36■□□□□ 0.05
CXCL12P48061 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.36■□□□□ 0.05
CXCL12P48061 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CXCL12P48061 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CXCL12P48061 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CXCL12P48061 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.36■□□□□ 0.05
CXCL12P48061 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC15.36■□□□□ 0.05
CXCL12P48061 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CXCL12P48061 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.36■□□□□ 0.05
CXCL12P48061 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms