Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 CRYGEP-201ENST00000412192 528 ntBASIC12.95□□□□□ -0.34
SNCAP37840 HNRNPDP1-201ENST00000439535 754 ntBASIC12.95□□□□□ -0.34
SNCAP37840 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 AC093909.1-201ENST00000504731 1122 ntBASIC12.95□□□□□ -0.34
SNCAP37840 KRT18P56-201ENST00000507275 550 ntBASIC12.95□□□□□ -0.34
SNCAP37840 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 AP002469.2-201ENST00000531724 424 ntBASIC12.95□□□□□ -0.34
SNCAP37840 AC012640.2-201ENST00000561606 901 ntBASIC12.95□□□□□ -0.34
SNCAP37840 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 AC117500.6-201ENST00000624871 588 ntBASIC12.95□□□□□ -0.34
SNCAP37840 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SNCAP37840 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 C18orf15-201ENST00000623680 2534 ntBASIC12.95□□□□□ -0.34
SNCAP37840 AC105250.1-201ENST00000509378 2057 ntBASIC12.95□□□□□ -0.34
SNCAP37840 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 AC148477.4-201ENST00000613430 1793 ntBASIC12.94□□□□□ -0.34
SNCAP37840 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SNCAP37840 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SNCAP37840 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 EMBP1-201ENST00000458200 901 ntBASIC12.94□□□□□ -0.34
SNCAP37840 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.94□□□□□ -0.34
SNCAP37840 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 AC107918.4-201ENST00000641966 3141 ntBASIC12.94□□□□□ -0.34
SNCAP37840 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SNCAP37840 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
SNCAP37840 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SNCAP37840 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms