Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.31□□□□□ -0.28
VAMP1P23763 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
VAMP1P23763 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
VAMP1P23763 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VAMP1P23763 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 RPS14P4-201ENST00000415880 418 ntBASIC13.3□□□□□ -0.28
VAMP1P23763 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.3□□□□□ -0.28
VAMP1P23763 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 GGTLC5P-201ENST00000617623 998 ntBASIC13.3□□□□□ -0.28
VAMP1P23763 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.3□□□□□ -0.28
VAMP1P23763 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 WASH6P-202ENST00000359512 1437 ntBASIC13.3□□□□□ -0.28
VAMP1P23763 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.3□□□□□ -0.28
VAMP1P23763 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VAMP1P23763 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 AC140479.7-201ENST00000636301 2332 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 AC041040.2-201ENST00000622926 2899 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 AC018892.3-201ENST00000623986 2499 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 RCN1P1-201ENST00000400413 996 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 ELK2BP-201ENST00000415014 1224 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 AP002383.4-201ENST00000442518 975 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 AC132008.2-207ENST00000454517 770 ntBASIC13.29□□□□□ -0.28
VAMP1P23763 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.29□□□□□ -0.28
VAMP1P23763 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.29□□□□□ -0.28
VAMP1P23763 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 PTGES3L-201ENST00000409446 1781 ntTSL 2 BASIC13.29□□□□□ -0.28
VAMP1P23763 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
VAMP1P23763 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VAMP1P23763 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 280.9 ms