Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 GHSR-202ENST00000427970 912 ntBASIC16.41■□□□□ 0.22
MMP8P22894 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 MEIS3P1-201ENST00000495167 958 ntBASIC16.41■□□□□ 0.22
MMP8P22894 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 AC135586.1-201ENST00000539323 574 ntBASIC16.41■□□□□ 0.22
MMP8P22894 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.41■□□□□ 0.22
MMP8P22894 SRD5A3P1-201ENST00000603021 949 ntBASIC16.41■□□□□ 0.22
MMP8P22894 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP8P22894 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 AL158212.4-201ENST00000624062 1286 ntBASIC16.41■□□□□ 0.22
MMP8P22894 AL645728.2-202ENST00000641679 227 ntBASIC16.41■□□□□ 0.22
MMP8P22894 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MMP8P22894 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP8P22894 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MMP8P22894 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP8P22894 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP8P22894 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MMP8P22894 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.4■□□□□ 0.22
MMP8P22894 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 BASP1P1-201ENST00000430708 665 ntBASIC16.4■□□□□ 0.22
MMP8P22894 AL589987.1-201ENST00000453380 819 ntBASIC16.4■□□□□ 0.22
MMP8P22894 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.4■□□□□ 0.22
MMP8P22894 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.4■□□□□ 0.22
MMP8P22894 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
MMP8P22894 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
MMP8P22894 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MMP8P22894 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.4■□□□□ 0.22
MMP8P22894 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MMP8P22894 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
MMP8P22894 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP8P22894 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP8P22894 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.39■□□□□ 0.21
MMP8P22894 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.39■□□□□ 0.21
MMP8P22894 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP8P22894 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.39■□□□□ 0.21
MMP8P22894 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms