Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RAB4AP20338 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
RAB4AP20338 AC069224.1-201ENST00000566372 1715 ntBASIC12.08□□□□□ -0.47
RAB4AP20338 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RAB4AP20338 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RAB4AP20338 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
RAB4AP20338 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB4AP20338 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 AC087481.3-201ENST00000602886 1894 ntBASIC12.08□□□□□ -0.48
RAB4AP20338 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB4AP20338 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RAB4AP20338 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RAB4AP20338 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB4AP20338 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RAB4AP20338 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB4AP20338 DANCR-204ENST00000444958 709 ntTSL 3 BASIC12.08□□□□□ -0.48
RAB4AP20338 SIGLEC30P-201ENST00000455569 941 ntBASIC12.08□□□□□ -0.48
RAB4AP20338 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.08□□□□□ -0.48
RAB4AP20338 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RAB4AP20338 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB4AP20338 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.08□□□□□ -0.48
RAB4AP20338 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RAB4AP20338 LINC01144-201ENST00000626198 1710 ntBASIC12.08□□□□□ -0.48
RAB4AP20338 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.08□□□□□ -0.48
RAB4AP20338 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
RAB4AP20338 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RAB4AP20338 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RAB4AP20338 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 AL928921.2-201ENST00000641325 2442 ntBASIC12.07□□□□□ -0.48
RAB4AP20338 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 CTNS-203ENST00000399306 803 ntTSL 3 BASIC12.07□□□□□ -0.48
RAB4AP20338 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.07□□□□□ -0.48
RAB4AP20338 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RAB4AP20338 VENTXP5-201ENST00000523979 775 ntBASIC12.07□□□□□ -0.48
RAB4AP20338 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
RAB4AP20338 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms