Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 FAM220BP-201ENST00000377689 816 ntBASIC16.43■□□□□ 0.22
LMNAP02545 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.43■□□□□ 0.22
LMNAP02545 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.43■□□□□ 0.22
LMNAP02545 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 BTNL10-201ENST00000595971 695 ntBASIC16.43■□□□□ 0.22
LMNAP02545 AC093726.1-201ENST00000608064 963 ntBASIC16.43■□□□□ 0.22
LMNAP02545 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.43■□□□□ 0.22
LMNAP02545 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.43■□□□□ 0.22
LMNAP02545 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LMNAP02545 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.43■□□□□ 0.22
LMNAP02545 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 AC013268.4-201ENST00000637413 2228 ntBASIC16.42■□□□□ 0.22
LMNAP02545 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
LMNAP02545 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.42■□□□□ 0.22
LMNAP02545 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 PRYP6-201ENST00000514804 343 ntBASIC16.42■□□□□ 0.22
LMNAP02545 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.42■□□□□ 0.22
LMNAP02545 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 AL133215.2-201ENST00000609242 977 ntBASIC16.42■□□□□ 0.22
LMNAP02545 AL033527.5-201ENST00000641382 801 ntBASIC16.42■□□□□ 0.22
LMNAP02545 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 SLC22A20-204ENST00000530038 1673 ntBASIC16.42■□□□□ 0.22
LMNAP02545 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LMNAP02545 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LMNAP02545 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LMNAP02545 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 AL596087.1-201ENST00000400979 1969 ntBASIC16.41■□□□□ 0.22
LMNAP02545 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 KLF2P4-201ENST00000451959 1225 ntBASIC16.41■□□□□ 0.22
LMNAP02545 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.41■□□□□ 0.22
LMNAP02545 AL512361.1-201ENST00000554200 418 ntBASIC16.41■□□□□ 0.22
LMNAP02545 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
LMNAP02545 RHOQP1-201ENST00000555758 579 ntBASIC16.41■□□□□ 0.22
LMNAP02545 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.41■□□□□ 0.22
LMNAP02545 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.41■□□□□ 0.22
LMNAP02545 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LMNAP02545 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LMNAP02545 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms