Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA1O95477 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA1O95477 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.17□□□□□ -0.3
ABCA1O95477 AC243960.2-201ENST00000600996 747 ntBASIC13.17□□□□□ -0.3
ABCA1O95477 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ABCA1O95477 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA1O95477 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA1O95477 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ABCA1O95477 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA1O95477 AL139384.1-201ENST00000612143 3047 ntBASIC13.17□□□□□ -0.3
ABCA1O95477 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA1O95477 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.17□□□□□ -0.3
ABCA1O95477 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ABCA1O95477 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.17□□□□□ -0.3
ABCA1O95477 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ABCA1O95477 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 FO393414.2-201ENST00000405153 598 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 GOLGA2P4-201ENST00000441462 777 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 AL355864.2-201ENST00000447420 863 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 FTH1P14-201ENST00000482930 551 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
ABCA1O95477 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.16□□□□□ -0.3
ABCA1O95477 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 KRT8P37-201ENST00000451609 1420 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 AC245100.5-201ENST00000452108 331 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 AP000812.2-201ENST00000538934 718 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.16□□□□□ -0.3
ABCA1O95477 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.16□□□□□ -0.3
ABCA1O95477 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 AL158212.4-201ENST00000624062 1286 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ABCA1O95477 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ABCA1O95477 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 CYP4F24P-201ENST00000586049 1580 ntBASIC13.16□□□□□ -0.3
ABCA1O95477 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.16□□□□□ -0.3
ABCA1O95477 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ABCA1O95477 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ABCA1O95477 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ABCA1O95477 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ABCA1O95477 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ABCA1O95477 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ABCA1O95477 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ABCA1O95477 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.15□□□□□ -0.3
ABCA1O95477 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ABCA1O95477 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ABCA1O95477 GPAA1P2-201ENST00000417923 928 ntBASIC13.15□□□□□ -0.3
ABCA1O95477 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
ABCA1O95477 AC068587.3-201ENST00000526613 355 ntBASIC13.15□□□□□ -0.3
ABCA1O95477 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.15□□□□□ -0.3
ABCA1O95477 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms