Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.42■□□□□ 0.38
CLSTN1O94985 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 GPS2P2-201ENST00000430745 888 ntBASIC17.42■□□□□ 0.38
CLSTN1O94985 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.42■□□□□ 0.38
CLSTN1O94985 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.42■□□□□ 0.38
CLSTN1O94985 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.42■□□□□ 0.38
CLSTN1O94985 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.42■□□□□ 0.38
CLSTN1O94985 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLSTN1O94985 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.42■□□□□ 0.38
CLSTN1O94985 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CLSTN1O94985 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC17.42■□□□□ 0.38
CLSTN1O94985 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLSTN1O94985 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 AC008677.1-201ENST00000519230 1561 ntBASIC17.41■□□□□ 0.38
CLSTN1O94985 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLSTN1O94985 AL139400.1-201ENST00000366220 510 ntBASIC17.41■□□□□ 0.38
CLSTN1O94985 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 MIR648-201ENST00000385046 94 ntBASIC17.41■□□□□ 0.38
CLSTN1O94985 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLSTN1O94985 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.41■□□□□ 0.38
CLSTN1O94985 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.41■□□□□ 0.38
CLSTN1O94985 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.41■□□□□ 0.38
CLSTN1O94985 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CLSTN1O94985 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.41■□□□□ 0.38
CLSTN1O94985 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CLSTN1O94985 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.41■□□□□ 0.38
CLSTN1O94985 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLSTN1O94985 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.41■□□□□ 0.38
CLSTN1O94985 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLSTN1O94985 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLSTN1O94985 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.4■□□□□ 0.38
CLSTN1O94985 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.4■□□□□ 0.38
CLSTN1O94985 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLSTN1O94985 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLSTN1O94985 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms