Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.41■□□□□ 0.22
OPHN1O60890 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.41■□□□□ 0.22
OPHN1O60890 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
OPHN1O60890 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
OPHN1O60890 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 AP003680.1-201ENST00000598970 3660 ntBASIC16.4■□□□□ 0.22
OPHN1O60890 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
OPHN1O60890 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
OPHN1O60890 AC004987.2-201ENST00000395959 1148 ntBASIC16.4■□□□□ 0.22
OPHN1O60890 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.4■□□□□ 0.22
OPHN1O60890 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 SPTLC1P1-201ENST00000447199 261 ntBASIC16.4■□□□□ 0.22
OPHN1O60890 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.4■□□□□ 0.22
OPHN1O60890 GPR53P-205ENST00000457298 1084 ntBASIC16.4■□□□□ 0.22
OPHN1O60890 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.4■□□□□ 0.22
OPHN1O60890 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 SPDYE12P-201ENST00000618416 771 ntBASIC16.4■□□□□ 0.22
OPHN1O60890 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.4■□□□□ 0.22
OPHN1O60890 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
OPHN1O60890 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
OPHN1O60890 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
OPHN1O60890 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
OPHN1O60890 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
OPHN1O60890 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 ARSEP1-201ENST00000420443 635 ntBASIC16.39■□□□□ 0.21
OPHN1O60890 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
OPHN1O60890 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.39■□□□□ 0.21
OPHN1O60890 RARRES2P9-201ENST00000565168 469 ntBASIC16.39■□□□□ 0.21
OPHN1O60890 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.39■□□□□ 0.21
OPHN1O60890 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
OPHN1O60890 AL138828.2-201ENST00000615812 383 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms