Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KDELR3O43731 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.79■□□□□ 0.12
KDELR3O43731 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDELR3O43731 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
KDELR3O43731 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDELR3O43731 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDELR3O43731 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDELR3O43731 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDELR3O43731 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KDELR3O43731 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.79■□□□□ 0.12
KDELR3O43731 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.79■□□□□ 0.12
KDELR3O43731 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.79■□□□□ 0.12
KDELR3O43731 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC112693.3-201ENST00000624819 1983 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 KRT8P22-201ENST00000562317 1415 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 CU639417.3-201ENST00000624240 1404 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 NME2P1-201ENST00000426182 414 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC011495.1-201ENST00000498085 584 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.78■□□□□ 0.12
KDELR3O43731 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.78■□□□□ 0.12
KDELR3O43731 ENPP7P5-201ENST00000541031 1031 ntBASIC15.78■□□□□ 0.12
KDELR3O43731 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.78■□□□□ 0.12
KDELR3O43731 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.78■□□□□ 0.12
KDELR3O43731 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
KDELR3O43731 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDELR3O43731 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KDELR3O43731 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.77■□□□□ 0.12
KDELR3O43731 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KDELR3O43731 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 AL138799.1-201ENST00000448213 1675 ntBASIC15.77■□□□□ 0.12
KDELR3O43731 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
KDELR3O43731 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.12
KDELR3O43731 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.77■□□□□ 0.12
KDELR3O43731 COX5BP8-201ENST00000416911 349 ntBASIC15.77■□□□□ 0.12
KDELR3O43731 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 AL162726.2-201ENST00000438986 1017 ntBASIC15.77■□□□□ 0.12
KDELR3O43731 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.77■□□□□ 0.12
KDELR3O43731 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
KDELR3O43731 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.77■□□□□ 0.12
KDELR3O43731 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KDELR3O43731 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.77■□□□□ 0.11
KDELR3O43731 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
KDELR3O43731 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDELR3O43731 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KDELR3O43731 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms