Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HOXA2O43364 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 AC148477.4-201ENST00000613430 1793 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HOXA2O43364 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HOXA2O43364 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXA2O43364 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXA2O43364 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXA2O43364 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 AL008638.5-201ENST00000623814 1298 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 KRT8P14-201ENST00000414254 1442 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 NKILA-202ENST00000614771 2598 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HOXA2O43364 AC007787.1-201ENST00000588095 1583 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HOXA2O43364 AC092364.2-201ENST00000596710 2692 ntBASIC16.59■□□□□ 0.25
HOXA2O43364 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.59■□□□□ 0.25
HOXA2O43364 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HOXA2O43364 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.59■□□□□ 0.25
HOXA2O43364 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
HOXA2O43364 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
HOXA2O43364 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.58■□□□□ 0.25
HOXA2O43364 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXA2O43364 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
HOXA2O43364 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HOXA2O43364 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HOXA2O43364 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HOXA2O43364 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXA2O43364 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC16.58■□□□□ 0.24
HOXA2O43364 AC004898.1-201ENST00000451057 766 ntBASIC16.58■□□□□ 0.24
HOXA2O43364 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.58■□□□□ 0.24
HOXA2O43364 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
HOXA2O43364 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXA2O43364 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
HOXA2O43364 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.58■□□□□ 0.24
HOXA2O43364 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HOXA2O43364 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXA2O43364 AC244452.3-201ENST00000636814 210 ntBASIC16.58■□□□□ 0.24
HOXA2O43364 AC068587.10-201ENST00000641210 219 ntBASIC16.58■□□□□ 0.24
HOXA2O43364 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXA2O43364 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 AC084364.1-201ENST00000551967 1556 ntBASIC16.58■□□□□ 0.24
HOXA2O43364 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXA2O43364 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.58■□□□□ 0.24
HOXA2O43364 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.58■□□□□ 0.24
HOXA2O43364 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HOXA2O43364 NFIC-211ENST00000641145 8399 ntBASIC16.57■□□□□ 0.24
HOXA2O43364 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
HOXA2O43364 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA2O43364 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA2O43364 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
HOXA2O43364 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA2O43364 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HOXA2O43364 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.57■□□□□ 0.24
HOXA2O43364 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HOXA2O43364 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HOXA2O43364 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms