Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PPT1-215ENST00000641471 2368 ntBASIC13.61□□□□□ -0.23
PHF1O43189 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 AC006058.4-201ENST00000624016 1670 ntBASIC13.61□□□□□ -0.23
PHF1O43189 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 MIR648-201ENST00000385046 94 ntBASIC13.61□□□□□ -0.23
PHF1O43189 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.61□□□□□ -0.23
PHF1O43189 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.61□□□□□ -0.23
PHF1O43189 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.61□□□□□ -0.23
PHF1O43189 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
PHF1O43189 AC073592.8-201ENST00000624126 511 ntBASIC13.61□□□□□ -0.23
PHF1O43189 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 AC100757.3-201ENST00000622361 1406 ntBASIC13.61□□□□□ -0.23
PHF1O43189 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 AC022144.1-201ENST00000602255 1580 ntBASIC13.61□□□□□ -0.23
PHF1O43189 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
PHF1O43189 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PHF1O43189 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PHF1O43189 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
PHF1O43189 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 HLA-H-201ENST00000383620 1096 ntBASIC13.6□□□□□ -0.23
PHF1O43189 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 SPTLC1P1-201ENST00000447199 261 ntBASIC13.6□□□□□ -0.23
PHF1O43189 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 GIMAP3P-201ENST00000495150 836 ntBASIC13.6□□□□□ -0.23
PHF1O43189 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.6□□□□□ -0.23
PHF1O43189 RNA5SP410-201ENST00000516285 106 ntBASIC13.6□□□□□ -0.23
PHF1O43189 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.6□□□□□ -0.23
PHF1O43189 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.6□□□□□ -0.23
PHF1O43189 AC018529.1-201ENST00000613063 361 ntBASIC13.6□□□□□ -0.23
PHF1O43189 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
PHF1O43189 AC099063.4-201ENST00000641099 1602 ntBASIC13.6□□□□□ -0.23
PHF1O43189 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 AC138969.3-201ENST00000546612 1459 ntBASIC13.6□□□□□ -0.23
PHF1O43189 AC138932.2-201ENST00000548268 1459 ntBASIC13.6□□□□□ -0.23
PHF1O43189 AC126755.4-201ENST00000549796 1459 ntBASIC13.6□□□□□ -0.23
PHF1O43189 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PHF1O43189 TNRC18P2-201ENST00000417666 2714 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms