Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 NME2P1-201ENST00000426182 414 ntBASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 RN7SL752P-201ENST00000463779 287 ntBASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 AC107373.2-201ENST00000607735 490 ntBASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
YJEFN3A6XGL0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 AC133539.2-201ENST00000604757 467 ntBASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 AL033527.5-201ENST00000641382 801 ntBASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 AC112693.3-201ENST00000624819 1983 ntBASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YJEFN3A6XGL0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 CU639417.3-201ENST00000624240 1404 ntBASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 C1QBPP1-201ENST00000400117 770 ntBASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YJEFN3A6XGL0 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms