Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.8■□□□□ 0.44
TMEM88BA6NKF7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC107464.3-201ENST00000609172 737 ntBASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC006158.1-201ENST00000610661 249 ntBASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC002472.3-201ENST00000640124 621 ntBASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 AC090502.4-201ENST00000551714 1386 ntBASIC17.79■□□□□ 0.44
TMEM88BA6NKF7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AC012441.2-201ENST00000444843 739 ntBASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AC073592.2-201ENST00000623062 780 ntBASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 FAM90A7P-201ENST00000382628 1395 ntBASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 FAM90A23P-201ENST00000400136 1395 ntBASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TMEM88BA6NKF7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AC055811.4-201ENST00000624039 1754 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 ACTBP7-201ENST00000418351 1124 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AP000358.1-201ENST00000456260 156 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 TMCO5B-205ENST00000530020 894 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 LINC01783-202ENST00000614408 828 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 BX284668.2-205ENST00000619677 828 ntBASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.77■□□□□ 0.44
TMEM88BA6NKF7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEM88BA6NKF7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms