Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
SBNO1A3KN83 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SBNO1A3KN83 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SBNO1A3KN83 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.83■□□□□ 0.92
SBNO1A3KN83 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC20.83■□□□□ 0.92
SBNO1A3KN83 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SBNO1A3KN83 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC20.83■□□□□ 0.92
SBNO1A3KN83 AL645728.2-202ENST00000641679 227 ntBASIC20.83■□□□□ 0.92
SBNO1A3KN83 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
SBNO1A3KN83 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SLC16A6P1-201ENST00000413214 1059 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 AL596276.2-201ENST00000447525 331 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 AC022616.1-201ENST00000518688 554 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 IQSEC3P1-201ENST00000538799 536 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 RN7SL555P-201ENST00000584742 339 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 AL805961.1-203ENST00000641078 1258 ntBASIC20.82■□□□□ 0.92
SBNO1A3KN83 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SBNO1A3KN83 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.82■□□□□ 0.92
SBNO1A3KN83 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AC104784.1-201ENST00000473096 294 ntBASIC20.81■□□□□ 0.92
SBNO1A3KN83 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.81■□□□□ 0.92
SBNO1A3KN83 MIR4783-201ENST00000580343 82 ntBASIC20.81■□□□□ 0.92
SBNO1A3KN83 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SBNO1A3KN83 AL353770.1-201ENST00000614915 403 ntBASIC20.81■□□□□ 0.92
SBNO1A3KN83 AC138466.3-201ENST00000619983 221 ntBASIC20.81■□□□□ 0.92
SBNO1A3KN83 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SBNO1A3KN83 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.8■□□□□ 0.92
SBNO1A3KN83 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms