Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
TRDV1A0A1B0GX56 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 AL359881.3-201ENST00000602640 1721 ntBASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 MBLAC2-202ENST00000514906 1936 ntBASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 CLEC4GP1-201ENST00000596555 870 ntBASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 AC097359.3-201ENST00000603982 1210 ntBASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 KRT8P37-201ENST00000451609 1420 ntBASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TRDV1A0A1B0GX56 CICP11-201ENST00000434745 2827 ntBASIC13.77□□□□□ -0.2
TRDV1A0A1B0GX56 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
TRDV1A0A1B0GX56 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
TRDV1A0A1B0GX56 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
TRDV1A0A1B0GX56 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TRDV1A0A1B0GX56 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TRDV1A0A1B0GX56 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms