Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC007274.2-201ENST00000421675 662 ntBASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC012618.1-201ENST00000461223 412 ntBASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 MIR7845-201ENST00000618396 99 ntBASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC004923.1-202ENST00000642106 209 ntBASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.57■□□□□ 0.72
LOC102724428A0A0B4J2F2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC104073.2-201ENST00000453737 312 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 MESTP3-201ENST00000503460 968 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC106794.1-201ENST00000506935 792 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL161670.2-201ENST00000557650 1227 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL353726.2-201ENST00000623259 884 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC055811.4-201ENST00000624039 1754 ntBASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LOC102724428A0A0B4J2F2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
LOC102724428A0A0B4J2F2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms