Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 MED15P5-201ENST00000423150 992 ntBASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC243562.1-201ENST00000560672 389 ntBASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC140113.2-201ENST00000604370 208 ntBASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC092902.6-201ENST00000641783 218 ntBASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
TRBV6-7A0A0A0MS04 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 BX640514.1-201ENST00000583223 1918 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AL590627.1-203ENST00000421194 1026 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 FAM8A3P-201ENST00000427218 844 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 SPCS2P4-201ENST00000436160 681 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 KRT8P23-201ENST00000560090 1207 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 LINC01225-203ENST00000563550 1244 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC106730.1-201ENST00000566722 1090 ntBASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-7A0A0A0MS04 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.1□□□□□ -0.31
TRBV6-7A0A0A0MS04 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.1□□□□□ -0.31
TRBV6-7A0A0A0MS04 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
TRBV6-7A0A0A0MS04 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms