Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC126755.4-201ENST00000549796 1459 ntBASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
RAI2Q9Y5P3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.83■□□□□ 0.13
RAI2Q9Y5P3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAI2Q9Y5P3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 GIMAP3P-201ENST00000495150 836 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 TPRX2P-201ENST00000535362 881 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC023310.3-201ENST00000557027 670 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC100756.1-201ENST00000562736 682 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC138749.3-201ENST00000567691 622 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC116165.1-201ENST00000611806 668 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AC090616.6-203ENST00000579186 1945 ntBASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAI2Q9Y5P3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 IGHV3-72-202ENST00000621503 303 ntBASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 AL158212.4-201ENST00000624062 1286 ntBASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAI2Q9Y5P3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 AL121723.1-201ENST00000445194 1519 ntBASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.81■□□□□ 0.12
RAI2Q9Y5P3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms