Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 AC022532.1-201ENST00000624563 1728 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SSR4P1-203ENST00000599569 2260 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 AL121723.1-201ENST00000445194 1519 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FAM207CP-201ENST00000443486 507 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 DOC2GP-202ENST00000514950 1163 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SPCS2P1-201ENST00000561636 679 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 AC104794.3-201ENST00000566840 1248 ntBASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HDGFL3Q9Y3E1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AC084364.1-201ENST00000551967 1556 ntBASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 BCRP1-201ENST00000444246 691 ntBASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 SPDYE18-201ENST00000510091 1050 ntBASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AC000095.1-201ENST00000603208 874 ntBASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 AC063926.3-201ENST00000624734 5658 ntBASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.06□□□□□ -0.16
HDGFL3Q9Y3E1 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms