Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 AC131009.4-201ENST00000624048 1740 ntBASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 NSUN5P1-202ENST00000421140 1535 ntBASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 NSUN5P2-203ENST00000457352 1529 ntBASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.97□□□□□ -0.01
LRCH1Q9Y2L9 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 IGHV3-47-201ENST00000425060 335 ntBASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
LRCH1Q9Y2L9 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LRCH1Q9Y2L9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TSPY19P-201ENST00000418461 509 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 TSPY18P-201ENST00000441642 509 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SIGLEC30P-201ENST00000455569 941 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 FOSL1P1-201ENST00000511041 816 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AC091304.2-201ENST00000564639 760 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AC138894.3-201ENST00000603787 634 ntBASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LRCH1Q9Y2L9 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms