Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ACTG1P17-201ENST00000558391 1119 ntBASIC16.51■□□□□ 0.23
TLR9Q9NR96 AC079328.1-201ENST00000560358 952 ntBASIC16.51■□□□□ 0.23
TLR9Q9NR96 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC16.51■□□□□ 0.23
TLR9Q9NR96 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TLR9Q9NR96 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AC020914.3-201ENST00000594712 304 ntBASIC16.5■□□□□ 0.23
TLR9Q9NR96 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AC006449.6-201ENST00000612330 2296 ntBASIC16.5■□□□□ 0.23
TLR9Q9NR96 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 LINC02199-201ENST00000506655 2702 ntBASIC16.5■□□□□ 0.23
TLR9Q9NR96 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TLR9Q9NR96 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.5■□□□□ 0.23
TLR9Q9NR96 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 ACTBP8-201ENST00000403258 1108 ntBASIC16.49■□□□□ 0.23
TLR9Q9NR96 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.49■□□□□ 0.23
TLR9Q9NR96 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TLR9Q9NR96 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
TLR9Q9NR96 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms