Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KIAA1549Q9HCM3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KRT8P44-201ENST00000441609 1350 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 GHSR-202ENST00000427970 912 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC009542.2-202ENST00000619004 1067 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC126365.1-201ENST00000578585 1514 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 REXO1L6P-201ENST00000603433 1515 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC134312.5-201ENST00000568031 1313 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 ACTBP8-201ENST00000403258 1108 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AP001889.1-201ENST00000525414 633 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 KRT90P-201ENST00000549264 1064 ntBASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.8□□□□□ -0.2
KIAA1549Q9HCM3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AC104640.1-201ENST00000562617 2109 ntBASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 AC126177.1-201ENST00000547829 2218 ntBASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KIAA1549Q9HCM3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms