Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE5Q9HCH3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CPNE5Q9HCH3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE5Q9HCH3 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPNE5Q9HCH3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CPNE5Q9HCH3 AC018665.1-201ENST00000622927 1362 ntBASIC15.21■□□□□ 0.02
CPNE5Q9HCH3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPNE5Q9HCH3 CLK3P2-201ENST00000427566 1453 ntBASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC099548.2-209ENST00000480264 625 ntBASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE5Q9HCH3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AC093525.8-201ENST00000624099 1342 ntBASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 PDIA3P1-201ENST00000471856 1510 ntBASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 AL512652.2-201ENST00000625156 1716 ntBASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE5Q9HCH3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms