Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 RPL5P21-201ENST00000404620 815 ntBASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC125807.1-201ENST00000483097 614 ntBASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 SLED1-202ENST00000512051 380 ntBASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC004449.1-201ENST00000564240 433 ntBASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC015911.4-201ENST00000588022 1070 ntBASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.92■□□□□ 0.14
LRRC40Q9H9A6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AC074338.1-201ENST00000416825 156 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 KLF2P3-201ENST00000451977 1087 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AC025048.3-201ENST00000590609 569 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 TEX28P1-201ENST00000613479 1221 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AL138828.2-201ENST00000615812 383 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 TEX28P2-201ENST00000617764 1221 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AC005702.4-201ENST00000618393 416 ntBASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LRRC40Q9H9A6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AP001160.2-201ENST00000596071 487 ntBASIC15.9■□□□□ 0.14
LRRC40Q9H9A6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms