Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 LINC01165-201ENST00000445190 1623 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
ABCA3Q99758 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCA3Q99758 AL357563.1-201ENST00000404728 395 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 SERF2-209ENST00000409646 559 ntTSL 4 BASIC20.18■□□□□ 0.82
ABCA3Q99758 AGGF1P2-201ENST00000426656 2106 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
ABCA3Q99758 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCA3Q99758 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.18■□□□□ 0.82
ABCA3Q99758 MIR6858-201ENST00000620733 67 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 KRT8P31-201ENST00000504812 1408 ntBASIC20.18■□□□□ 0.82
ABCA3Q99758 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ABCA3Q99758 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ABCA3Q99758 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 AC009090.5-201ENST00000624886 2285 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 AC239868.1-201ENST00000369385 493 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 MIR557-201ENST00000385239 98 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC20.17■□□□□ 0.82
ABCA3Q99758 AC010234.1-201ENST00000494599 870 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 ORAOV1P1-201ENST00000503108 395 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.17■□□□□ 0.82
ABCA3Q99758 AL022344.2-201ENST00000568976 968 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.17■□□□□ 0.82
ABCA3Q99758 AC084781.1-201ENST00000613737 656 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC20.17■□□□□ 0.82
ABCA3Q99758 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ABCA3Q99758 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 REXO1L5P-201ENST00000622260 2098 ntBASIC20.17■□□□□ 0.82
ABCA3Q99758 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ABCA3Q99758 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
ABCA3Q99758 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ABCA3Q99758 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 AC127383.1-201ENST00000444697 1800 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCA3Q99758 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 AC012362.1-201ENST00000434906 739 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.16■□□□□ 0.82
ABCA3Q99758 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 AC105137.3-201ENST00000617588 984 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.16■□□□□ 0.82
ABCA3Q99758 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
ABCA3Q99758 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCA3Q99758 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCA3Q99758 AL583805.1-201ENST00000391389 531 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC20.16■□□□□ 0.82
ABCA3Q99758 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC20.16■□□□□ 0.82
ABCA3Q99758 MIR5196-201ENST00000578146 115 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 AC005041.3-201ENST00000606287 649 ntBASIC20.16■□□□□ 0.82
ABCA3Q99758 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
ABCA3Q99758 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ABCA3Q99758 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC20.15■□□□□ 0.82
ABCA3Q99758 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
ABCA3Q99758 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ABCA3Q99758 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.15■□□□□ 0.82
ABCA3Q99758 AC020910.5-201ENST00000623668 1865 ntBASIC20.15■□□□□ 0.82
ABCA3Q99758 RPL5P21-201ENST00000404620 815 ntBASIC20.15■□□□□ 0.82
ABCA3Q99758 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms