Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 AC148477.4-201ENST00000613430 1793 ntBASIC11.79□□□□□ -0.52
LINC00477Q96M19 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 AP3S2-216ENST00000617003 1561 ntBASIC11.79□□□□□ -0.52
LINC00477Q96M19 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00477Q96M19 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LINC00477Q96M19 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
LINC00477Q96M19 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.79□□□□□ -0.52
LINC00477Q96M19 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LINC00477Q96M19 FAM45BP-202ENST00000592932 1624 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 TEX30-205ENST00000376029 959 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ADH5P3-201ENST00000433842 1137 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 FDX1P1-201ENST00000449115 551 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 KRT8P48-201ENST00000515599 1220 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 AC097359.3-201ENST00000603982 1210 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 AC120114.3-201ENST00000611923 658 ntBASIC11.78□□□□□ -0.52
LINC00477Q96M19 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
LINC00477Q96M19 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LINC00477Q96M19 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.77□□□□□ -0.52
LINC00477Q96M19 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
LINC00477Q96M19 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
LINC00477Q96M19 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00477Q96M19 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
LINC00477Q96M19 YBX2P1-201ENST00000394192 760 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 FO393414.2-201ENST00000405153 598 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 AC023274.1-201ENST00000418278 595 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 AC136604.1-201ENST00000418535 575 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 AL353705.2-201ENST00000428243 662 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 MKNK2P1-201ENST00000437526 628 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 AL592309.1-201ENST00000443127 649 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 TIMM8BP1-201ENST00000452384 211 ntBASIC11.77□□□□□ -0.53
LINC00477Q96M19 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
LINC00477Q96M19 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.77□□□□□ -0.53
LINC00477Q96M19 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms