Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 MIR346-201ENST00000362234 95 ntBASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AC024267.1-201ENST00000582320 895 ntBASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AC079781.5-202ENST00000641784 3743 ntBASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHAMP1Q96JM3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 FAM220BP-201ENST00000377689 816 ntBASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 FAM58CP-201ENST00000435741 640 ntBASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 EEF1DP4-201ENST00000446006 880 ntBASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHAMP1Q96JM3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AC079140.1-201ENST00000508039 487 ntBASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 BANF1P1-201ENST00000553684 263 ntBASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHAMP1Q96JM3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms