Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 ALG1L5P-201ENST00000482043 771 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 KRT8P48-201ENST00000515599 1220 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 IGHV3-62-201ENST00000520057 340 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 KRT8P23-201ENST00000560090 1207 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AC010327.4-202ENST00000591484 748 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AP3S2-216ENST00000617003 1561 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AL390755.1-201ENST00000623716 2027 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 AL607033.1-201ENST00000623900 1599 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AL359183.1-201ENST00000623796 2132 ntBASIC14.11□□□□□ -0.15
PTP4A1Q93096 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PTP4A1Q93096 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PTP4A1Q93096 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AJ011931.1-201ENST00000618749 2492 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 ZBED1P1-201ENST00000502364 1930 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 TIMM8BP1-201ENST00000452384 211 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AC079140.1-201ENST00000508039 487 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 YBX1P5-201ENST00000509441 847 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 MIR4469-201ENST00000583919 79 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 AC084121.4-201ENST00000641598 221 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 AF228730.8-201ENST00000642140 221 ntBASIC14.1□□□□□ -0.15
PTP4A1Q93096 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PTP4A1Q93096 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
PTP4A1Q93096 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 AC007686.3-201ENST00000619017 3487 ntBASIC14.09□□□□□ -0.15
PTP4A1Q93096 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PTP4A1Q93096 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PTP4A1Q93096 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms