Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SPDYE11-202ENST00000450699 704 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 ALG1L5P-201ENST00000482043 771 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SPDYE9P-201ENST00000570642 692 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AC026120.1-201ENST00000611536 926 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SPDYE10P-202ENST00000612005 668 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SPDYE8P-202ENST00000612377 668 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AC009090.5-201ENST00000624886 2285 ntBASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC126365.1-201ENST00000578585 1514 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AL589702.1-201ENST00000641229 1509 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC067750.1-201ENST00000608826 6545 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC105233.2-201ENST00000523697 349 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AF228730.5-201ENST00000530288 346 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC005829.1-201ENST00000570002 483 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC073389.1-201ENST00000595595 795 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 AC008267.7-201ENST00000624570 1194 ntBASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.24□□□□□ -0.29
RTN4IP1Q8WWV3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms