Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 FAM8A4P-201ENST00000435433 1213 ntBASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 AL161670.2-201ENST00000557650 1227 ntBASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 RN7SL736P-201ENST00000613111 269 ntBASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 YRDCP1-201ENST00000621419 643 ntBASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 AL353726.2-201ENST00000623259 884 ntBASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CFAP43Q8NDM7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 AC103988.2-201ENST00000561804 725 ntBASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 AC100757.4-201ENST00000626934 759 ntBASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 HLA-C-210ENST00000640219 976 ntBASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
CFAP43Q8NDM7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AC007787.1-201ENST00000588095 1583 ntBASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CFAP43Q8NDM7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 AL645937.2-201ENST00000396808 931 ntBASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 HIST2H2BB-201ENST00000449108 381 ntBASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 MIR6756-201ENST00000616240 63 ntBASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 AC092127.1-201ENST00000567093 3455 ntBASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CFAP43Q8NDM7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 PDIA3P2-201ENST00000428073 158 ntBASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 CEP164P1-201ENST00000455142 418 ntBASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 SYT17-208ENST00000568433 812 ntTSL 3 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 ENPP7P14-201ENST00000621765 1040 ntBASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 AP001002.3-201ENST00000623482 206 ntBASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 AC011491.1-203ENST00000637688 543 ntBASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CFAP43Q8NDM7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CFAP43Q8NDM7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CFAP43Q8NDM7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms