Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 RN7SKP214-201ENST00000364208 315 ntBASIC10.66□□□□□ -0.7
CSMD3Q7Z407 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CSMD3Q7Z407 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC011477.6-201ENST00000604980 1927 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AL008707.1-201ENST00000422498 534 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC019193.1-201ENST00000506678 823 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 RTN3P1-201ENST00000536295 711 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC009084.3-201ENST00000623356 437 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AL805961.1-201ENST00000642026 753 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC009955.4-201ENST00000597192 544 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 AC087045.2-201ENST00000606279 1003 ntBASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CSMD3Q7Z407 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 SLC16A6P1-201ENST00000413214 1059 ntBASIC10.65□□□□□ -0.71
CSMD3Q7Z407 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 RPL18P13-201ENST00000478088 569 ntBASIC10.65□□□□□ -0.71
CSMD3Q7Z407 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 MIR6842-201ENST00000612539 65 ntBASIC10.65□□□□□ -0.71
CSMD3Q7Z407 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC10.65□□□□□ -0.71
CSMD3Q7Z407 AC127024.7-201ENST00000625101 200 ntBASIC10.65□□□□□ -0.71
CSMD3Q7Z407 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 MST1L-201ENST00000442552 2185 ntBASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 MFF-204ENST00000353339 2186 ntTSL 5 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AC009779.1-201ENST00000551138 283 ntBASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AC092171.5-201ENST00000608012 942 ntBASIC10.64□□□□□ -0.71
CSMD3Q7Z407 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 REXO1L5P-201ENST00000622260 2098 ntBASIC10.64□□□□□ -0.71
CSMD3Q7Z407 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.64□□□□□ -0.71
CSMD3Q7Z407 AL358472.3-201ENST00000608147 415 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms